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PESDserv
Compare binding sites of proteins

Ligand file to Upload in PDB format:

Protein receptor file to Upload in PDB format:


Note: (1) The ligand coordinates are used to demarcate the binding site on the protein surface. Please make sure that both the ligand and the protein are in the same coordinate system.
(2) All atoms in the protein file will be treated as protein. So, please make sure to remove the ligand atoms (whose site you want to compare) from the protein file before uploading.



Distance Calculation used:

Number of results returned:



A typical calculation takes 5 minutes to complete

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